CE_Chiral_Separation_Checker

CE Chiral Separation Checker

Lumex QC URS & FS input.csv output.json rule-based LIMS-ready capillary electrophoresis
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Utility description: CE Chiral Separation Checker

CE Chiral Separation Checker — Control of Enantiomeric Purity (CE)

ℹ️  Utility checks critical parameters of chiral separation by Capillary Electrophoresis:
   • Enantiomeric Excess (EE): ≥99.0%
   • Impurity Enantiomer Content: ≤0.5%
   • Resolution between peaks (Rs): ≥1.5
   • Migration time difference: >0.1 min

⚠️  CRITICAL: Low resolution (Rs < 1.5) → risk of incorrect integration and false results!
   Exceeding impurity enantiomer limit → reduced activity or drug toxicity.

Usage:
 CE_Chiral_Separation_Checker.exe                            → demo mode (console output)
 CE_Chiral_Separation_Checker.exe input.csv output.json      → evaluate your data

Input format:
BatchNumber,MainEnantiomerArea,ImpurityEnantiomerArea,MigrationTimeMain,MigrationTimeImpurity,Resolution

Example:
 CHIRAL-CE-2026-001,1000000,2000,12.5,13.8,2.5

— WHY IS THIS NEEDED?
Many modern drug substances are chiral molecules.
• Often only one enantiomer has therapeutic activity, while the other may be inactive or toxic (e.g., thalidomide case).
• Capillary Electrophoresis (CE) with chiral selectors (cyclodextrins, macrolides) is a powerful tool for enantiomer separation.
• The method is highly efficient, requires small sample volumes and consumables.
• Enantiomeric purity control is mandatory for registration of most new chiral drugs (ICH Q6A).

⚠️  CRITICAL:
• Enantiomeric Excess (EE) ≥99.0% — standard requirement for high-purity substances.
• Resolution (Rs) ≥1.5 ensures baseline peak separation, necessary for accurate quantification.
• Buffer composition (pH, cyclodextrin concentration) critically affects selectivity and must be strictly controlled.
• Capillary temperature affects buffer viscosity and migration time; thermostating is required.

Key features:
• Calculation of Enantiomeric Excess (EE) and impurity percentage.
• Separation quality control (Resolution).
• Support for CE methods with chiral selectors.

Critical parameters:
• Enantiomeric Excess (EE): ≥99.0%
• Impurity Enantiomer: ≤0.5%
• Resolution (Rs): ≥1.5

💡 Usage tips:
1. Use buffers with beta- or gamma-cyclodextrins for separating neutral molecules.
2. For acidic/basic substances, adjust buffer pH so the analyte is in neutral or charged form optimal for selector interaction.
3. Check system suitability before analysis series.
4. Pay attention to peak migration order (which enantiomer elutes first).
5. If resolution is low, try changing chiral selector concentration or separation voltage.

⚠️ Note: Unlike chiral HPLC, in CE the chiral selector is in the mobile phase (buffer), making the method more flexible and cheaper to develop, but demanding regarding buffer stability.

input.csv

BatchNumber,MainArea,ImpurityArea,TimeMain,TimeImpurity,Resolution
CHIRAL-CE-2026-001,1000000,2000,12.5,13.8,2.5
CHIRAL-CE-2026-002,950000,5000,12.4,13.7,2.3
CHIRAL-FAIL-2026-003,900000,50000,12.5,12.6,0.8

Utility description

CE Chiral Separation Checker — Control of Enantiomeric Purity (CE)

ℹ️  Utility checks critical parameters of chiral separation by Capillary Electrophoresis:
   • Enantiomeric Excess (EE): ≥99.0%
   • Impurity Enantiomer Content: ≤0.5%
   • Resolution between peaks (Rs): ≥1.5
   • Migration time difference: >0.1 min

⚠️  CRITICAL: Low resolution (Rs < 1.5) → risk of incorrect integration and false results!
   Exceeding impurity enantiomer limit → reduced activity or drug toxicity.

Usage:
 CE_Chiral_Separation_Checker.exe                            → demo mode (console output)
 CE_Chiral_Separation_Checker.exe input.csv output.json      → evaluate your data

Input format:
BatchNumber,MainEnantiomerArea,ImpurityEnantiomerArea,MigrationTimeMain,MigrationTimeImpurity,Resolution

Example:
 CHIRAL-CE-2026-001,1000000,2000,12.5,13.8,2.5

— WHY IS THIS NEEDED?
Many modern drug substances are chiral molecules.
• Often only one enantiomer has therapeutic activity, while the other may be inactive or toxic (e.g., thalidomide case).
• Capillary Electrophoresis (CE) with chiral selectors (cyclodextrins, macrolides) is a powerful tool for enantiomer separation.
• The method is highly efficient, requires small sample volumes and consumables.
• Enantiomeric purity control is mandatory for registration of most new chiral drugs (ICH Q6A).

⚠️  CRITICAL:
• Enantiomeric Excess (EE) ≥99.0% — standard requirement for high-purity substances.
• Resolution (Rs) ≥1.5 ensures baseline peak separation, necessary for accurate quantification.
• Buffer composition (pH, cyclodextrin concentration) critically affects selectivity and must be strictly controlled.
• Capillary temperature affects buffer viscosity and migration time; thermostating is required.

Key features:
• Calculation of Enantiomeric Excess (EE) and impurity percentage.
• Separation quality control (Resolution).
• Support for CE methods with chiral selectors.

Critical parameters:
• Enantiomeric Excess (EE): ≥99.0%
• Impurity Enantiomer: ≤0.5%
• Resolution (Rs): ≥1.5

💡 Usage tips:
1. Use buffers with beta- or gamma-cyclodextrins for separating neutral molecules.
2. For acidic/basic substances, adjust buffer pH so the analyte is in neutral or charged form optimal for selector interaction.
3. Check system suitability before analysis series.
4. Pay attention to peak migration order (which enantiomer elutes first).
5. If resolution is low, try changing chiral selector concentration or separation voltage.

⚠️ Note: Unlike chiral HPLC, in CE the chiral selector is in the mobile phase (buffer), making the method more flexible and cheaper to develop, but demanding regarding buffer stability.

URS & FS — User Requirements and Functional Specification

This document describes the controlled interface, user requirements and functional behaviour of CE_Chiral_Separation_Checker. The utility is intended for automated verification of laboratory, pharmacopoeial, analytical or manufacturing QC parameters using input.csv and producing a structured output.json result.

Domain limits and critical parameters

Before production use, all limits must be verified against the approved specification, registration dossier, pharmacopoeial monograph, validated method and local SOPs.
  • • Enantiomeric Excess (EE): ≥99.0%
  • • Impurity Enantiomer Content: ≤0.5%
  • • Resolution between peaks (Rs): ≥1.5
  • • Migration time difference: >0.1 min
  • Exceeding impurity enantiomer limit → reduced activity or drug toxicity.
  • • Often only one enantiomer has therapeutic activity, while the other may be inactive or toxic (e.g., thalidomide case).
  • • Capillary Electrophoresis (CE) with chiral selectors (cyclodextrins, macrolides) is a powerful tool for enantiomer separation.
  • • The method is highly efficient, requires small sample volumes and consumables.
  • • Enantiomeric purity control is mandatory for registration of most new chiral drugs (ICH Q6A).
  • • Enantiomeric Excess (EE) ≥99.0% — standard requirement for high-purity substances.
  • • Resolution (Rs) ≥1.5 ensures baseline peak separation, necessary for accurate quantification.
  • • Buffer composition (pH, cyclodextrin concentration) critically affects selectivity and must be strictly controlled.
  • • Capillary temperature affects buffer viscosity and migration time; thermostating is required.
  • • Calculation of Enantiomeric Excess (EE) and impurity percentage.
  • • Separation quality control (Resolution).
  • • Support for CE methods with chiral selectors.

URS — User Requirements Specification

IDRequirementCriticalityAcceptance criterion
URS-001The utility shall accept an input.csv file with exact headers defined in the data contract.HighThe file is processed without manual header editing.
URS-002The utility shall perform deterministic evaluation for CE Chiral Separation Checker using input values, approved limits and domain rules.HighEach row receives a PASS / WARNING / FAIL status.
URS-003The utility shall validate mandatory fields, data types, numeric ranges, units and domain plausibility.HighSchema, format and conversion errors are explicitly reported.
URS-004The utility shall identify critical deviations for parameters stated in the method description and specification.HighA critical deviation causes FAIL or a dedicated critical finding.
URS-005The utility shall generate output.json with machine-readable results, source values, warnings and failures.HighJSON is suitable for LIMS/ELN/MES integration, QA/QC review and archival.
URS-006The result shall not depend on machine learning or undocumented heuristics.MediumAll decisions are based on explicit rules, thresholds and input values.
URS-007The system shall preserve traceability between batch/sample, input data, applied rules and final status.HighThe output contains the batch/sample identifier and checked parameters.
URS-008The documentation shall support IQ/OQ/PQ preparation and inspection discussion.MediumURS, FS, CSV/JSON contract and test scenarios are supplied with the utility.
URS-009The utility shall support batch processing of multiple input.csv rows.MediumEach row is evaluated independently; errors in one row do not mask errors in others.
URS-010The utility shall support a simple operating model: demo mode and execution with input/output files.MediumThe CLI scenario is reproducible in test and production environments.

input.csv contract

#FieldTypeSamplePurpose
1BatchNumberstringCHIRAL-CE-2026-001Batch or lot identifier used for traceability, review and deviation investigation.
2MainAreadecimal1000000Controlled input parameter used by deterministic QC rules and traceable result generation.
3ImpurityAreadecimal2000Controlled impurity used to assess conformance to approved specification.
4TimeMaindecimal12.5Time-related process or analytical observation parameter.
5TimeImpuritydecimal13.8Time-related process or analytical observation parameter.
6Resolutionstring / decimal2.5Controlled input parameter used by deterministic QC rules and traceable result generation.
BatchNumber,MainArea,ImpurityArea,TimeMain,TimeImpurity,Resolution
CHIRAL-CE-2026-001,1000000,2000,12.5,13.8,2.5
CHIRAL-CE-2026-002,950000,5000,12.4,13.7,2.3
CHIRAL-FAIL-2026-003,900000,50000,12.5,12.6,0.8

FS — Functional Specification

IDFunctionImplementation
FS-001CSV importRead input.csv in UTF-8/CSV-compatible format and validate the header and expected columns.
FS-002Schema validationCheck mandatory fields, column count, critical missing values and row structure.
FS-003Type conversionConvert numeric, flag and text values; invalid formats are recorded as row-level errors.
FS-004Domain rule engineApply domain rules for CE Chiral Separation Checker, including limits from the utility description and approved specification.
FS-005Status aggregationProduce final status: FAIL for critical failure, WARNING for non-critical deviation, PASS for conformance.
FS-006JSON exportWrite output.json with detailed checks, source values, warnings, failures and critical findings.
FS-007Audit supportKeep the result structure suitable for review, deviation investigation, calculation reproduction and IQ/OQ/PQ preparation.
FS-008Integration contractSupport the production scenario: LIMS/ELN/MES creates input.csv, the utility returns output.json, and the portal displays description and documentation.
FS-009Error handlingReport errors unambiguously and do not substitute missing values with calculated values unless the rule is explicitly defined.
FS-010Version control supportDocument the utility version, input contract, executable checksum and rule application date.

Example output.json

{
  "utilityId": "ce-chiral-separation-checker",
  "utilityName": "CE_Chiral_Separation_Checker",
  "overallStatus": "PASS|WARNING|FAIL",
  "sourceFile": "input.csv",
  "checks": [
    {
      "parameter": "BatchNumber",
      "value": "CHIRAL-CE-2026-001",
      "status": "PASS|WARNING|FAIL",
      "message": "Rule-based check result"
    },
    {
      "parameter": "MainArea",
      "value": "1000000",
      "status": "PASS|WARNING|FAIL",
      "message": "Rule-based check result"
    },
    {
      "parameter": "ImpurityArea",
      "value": "2000",
      "status": "PASS|WARNING|FAIL",
      "message": "Rule-based check result"
    },
    {
      "parameter": "TimeMain",
      "value": "12.5",
      "status": "PASS|WARNING|FAIL",
      "message": "Rule-based check result"
    },
    {
      "parameter": "TimeImpurity",
      "value": "13.8",
      "status": "PASS|WARNING|FAIL",
      "message": "Rule-based check result"
    },
    {
      "parameter": "Resolution",
      "value": "2.5",
      "status": "PASS|WARNING|FAIL",
      "message": "Rule-based check result"
    }
  ],
  "criticalFindings": [],
  "warnings": [],
  "generatedFor": "QA/QC review and LIMS integration"
}

Traceability matrix

URSFSOQ/PQ coverage
URS-001, URS-003FS-001, FS-002, FS-003OQ-001/OQ-002/OQ-003
URS-002, URS-004FS-004, FS-005OQ-004/PQ-001
URS-005, URS-007FS-006, FS-007OQ-005/PQ-002
URS-008, URS-010FS-008, FS-010IQ-001/OQ-006

OQ/PQ test scenarios

IDScenarioExpected result
OQ-001Valid sample rowPASS or acceptable WARNING according to the rules.
OQ-002Mandatory column missingSchema error or FAIL.
OQ-003Non-numeric value in numeric fieldType-conversion error.
OQ-004Critical parameter outside limitFAIL and critical finding.
OQ-005Multiple rows with different statusesIndependent row-level evaluation.
PQ-001User real batch/sampleReviewed result with retained input/output files.

QA/QC and change control

  • Do not rename columns without updating the validator, documentation and test set.
  • Retain input.csv, output.json, executable version, documentation and checksum.
  • Before production use, perform IQ/OQ/PQ or equivalent CSV/CSA verification.
  • Critical limits must be verified against the approved specification, local SOPs and registration dossier.

Included in packages

Lumex QC Suite

A single Lumex package combining the former Lumex and Lumex2 sets: instrumental and general pharmaceutical QC, AAS/ICP, CE, HPLC, NIR/PAT, stability, dissolution, content uniformity, system suitability and statistical control.

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