CE_Chiral_Separation_Checker
CE Chiral Separation Checker
Lumex QC URS & FS input.csv output.json rule-based LIMS-ready capillary electrophoresis
Open selectionUtility description: CE Chiral Separation Checker
CE Chiral Separation Checker — Control of Enantiomeric Purity (CE) ℹ️ Utility checks critical parameters of chiral separation by Capillary Electrophoresis: • Enantiomeric Excess (EE): ≥99.0% • Impurity Enantiomer Content: ≤0.5% • Resolution between peaks (Rs): ≥1.5 • Migration time difference: >0.1 min ⚠️ CRITICAL: Low resolution (Rs < 1.5) → risk of incorrect integration and false results! Exceeding impurity enantiomer limit → reduced activity or drug toxicity. Usage: CE_Chiral_Separation_Checker.exe → demo mode (console output) CE_Chiral_Separation_Checker.exe input.csv output.json → evaluate your data Input format: BatchNumber,MainEnantiomerArea,ImpurityEnantiomerArea,MigrationTimeMain,MigrationTimeImpurity,Resolution Example: CHIRAL-CE-2026-001,1000000,2000,12.5,13.8,2.5 — WHY IS THIS NEEDED? Many modern drug substances are chiral molecules. • Often only one enantiomer has therapeutic activity, while the other may be inactive or toxic (e.g., thalidomide case). • Capillary Electrophoresis (CE) with chiral selectors (cyclodextrins, macrolides) is a powerful tool for enantiomer separation. • The method is highly efficient, requires small sample volumes and consumables. • Enantiomeric purity control is mandatory for registration of most new chiral drugs (ICH Q6A). ⚠️ CRITICAL: • Enantiomeric Excess (EE) ≥99.0% — standard requirement for high-purity substances. • Resolution (Rs) ≥1.5 ensures baseline peak separation, necessary for accurate quantification. • Buffer composition (pH, cyclodextrin concentration) critically affects selectivity and must be strictly controlled. • Capillary temperature affects buffer viscosity and migration time; thermostating is required. Key features: • Calculation of Enantiomeric Excess (EE) and impurity percentage. • Separation quality control (Resolution). • Support for CE methods with chiral selectors. Critical parameters: • Enantiomeric Excess (EE): ≥99.0% • Impurity Enantiomer: ≤0.5% • Resolution (Rs): ≥1.5 💡 Usage tips: 1. Use buffers with beta- or gamma-cyclodextrins for separating neutral molecules. 2. For acidic/basic substances, adjust buffer pH so the analyte is in neutral or charged form optimal for selector interaction. 3. Check system suitability before analysis series. 4. Pay attention to peak migration order (which enantiomer elutes first). 5. If resolution is low, try changing chiral selector concentration or separation voltage. ⚠️ Note: Unlike chiral HPLC, in CE the chiral selector is in the mobile phase (buffer), making the method more flexible and cheaper to develop, but demanding regarding buffer stability.
input.csv
BatchNumber,MainArea,ImpurityArea,TimeMain,TimeImpurity,Resolution CHIRAL-CE-2026-001,1000000,2000,12.5,13.8,2.5 CHIRAL-CE-2026-002,950000,5000,12.4,13.7,2.3 CHIRAL-FAIL-2026-003,900000,50000,12.5,12.6,0.8
Utility description
CE Chiral Separation Checker — Control of Enantiomeric Purity (CE) ℹ️ Utility checks critical parameters of chiral separation by Capillary Electrophoresis: • Enantiomeric Excess (EE): ≥99.0% • Impurity Enantiomer Content: ≤0.5% • Resolution between peaks (Rs): ≥1.5 • Migration time difference: >0.1 min ⚠️ CRITICAL: Low resolution (Rs < 1.5) → risk of incorrect integration and false results! Exceeding impurity enantiomer limit → reduced activity or drug toxicity. Usage: CE_Chiral_Separation_Checker.exe → demo mode (console output) CE_Chiral_Separation_Checker.exe input.csv output.json → evaluate your data Input format: BatchNumber,MainEnantiomerArea,ImpurityEnantiomerArea,MigrationTimeMain,MigrationTimeImpurity,Resolution Example: CHIRAL-CE-2026-001,1000000,2000,12.5,13.8,2.5 — WHY IS THIS NEEDED? Many modern drug substances are chiral molecules. • Often only one enantiomer has therapeutic activity, while the other may be inactive or toxic (e.g., thalidomide case). • Capillary Electrophoresis (CE) with chiral selectors (cyclodextrins, macrolides) is a powerful tool for enantiomer separation. • The method is highly efficient, requires small sample volumes and consumables. • Enantiomeric purity control is mandatory for registration of most new chiral drugs (ICH Q6A). ⚠️ CRITICAL: • Enantiomeric Excess (EE) ≥99.0% — standard requirement for high-purity substances. • Resolution (Rs) ≥1.5 ensures baseline peak separation, necessary for accurate quantification. • Buffer composition (pH, cyclodextrin concentration) critically affects selectivity and must be strictly controlled. • Capillary temperature affects buffer viscosity and migration time; thermostating is required. Key features: • Calculation of Enantiomeric Excess (EE) and impurity percentage. • Separation quality control (Resolution). • Support for CE methods with chiral selectors. Critical parameters: • Enantiomeric Excess (EE): ≥99.0% • Impurity Enantiomer: ≤0.5% • Resolution (Rs): ≥1.5 💡 Usage tips: 1. Use buffers with beta- or gamma-cyclodextrins for separating neutral molecules. 2. For acidic/basic substances, adjust buffer pH so the analyte is in neutral or charged form optimal for selector interaction. 3. Check system suitability before analysis series. 4. Pay attention to peak migration order (which enantiomer elutes first). 5. If resolution is low, try changing chiral selector concentration or separation voltage. ⚠️ Note: Unlike chiral HPLC, in CE the chiral selector is in the mobile phase (buffer), making the method more flexible and cheaper to develop, but demanding regarding buffer stability.
URS & FS — User Requirements and Functional Specification
This document describes the controlled interface, user requirements and functional behaviour of CE_Chiral_Separation_Checker. The utility is intended for automated verification of laboratory, pharmacopoeial, analytical or manufacturing QC parameters using input.csv and producing a structured output.json result.
Domain limits and critical parameters
Before production use, all limits must be verified against the approved specification, registration dossier, pharmacopoeial monograph, validated method and local SOPs.
- • Enantiomeric Excess (EE): ≥99.0%
- • Impurity Enantiomer Content: ≤0.5%
- • Resolution between peaks (Rs): ≥1.5
- • Migration time difference: >0.1 min
- Exceeding impurity enantiomer limit → reduced activity or drug toxicity.
- • Often only one enantiomer has therapeutic activity, while the other may be inactive or toxic (e.g., thalidomide case).
- • Capillary Electrophoresis (CE) with chiral selectors (cyclodextrins, macrolides) is a powerful tool for enantiomer separation.
- • The method is highly efficient, requires small sample volumes and consumables.
- • Enantiomeric purity control is mandatory for registration of most new chiral drugs (ICH Q6A).
- • Enantiomeric Excess (EE) ≥99.0% — standard requirement for high-purity substances.
- • Resolution (Rs) ≥1.5 ensures baseline peak separation, necessary for accurate quantification.
- • Buffer composition (pH, cyclodextrin concentration) critically affects selectivity and must be strictly controlled.
- • Capillary temperature affects buffer viscosity and migration time; thermostating is required.
- • Calculation of Enantiomeric Excess (EE) and impurity percentage.
- • Separation quality control (Resolution).
- • Support for CE methods with chiral selectors.
URS — User Requirements Specification
| ID | Requirement | Criticality | Acceptance criterion |
|---|---|---|---|
| URS-001 | The utility shall accept an input.csv file with exact headers defined in the data contract. | High | The file is processed without manual header editing. |
| URS-002 | The utility shall perform deterministic evaluation for CE Chiral Separation Checker using input values, approved limits and domain rules. | High | Each row receives a PASS / WARNING / FAIL status. |
| URS-003 | The utility shall validate mandatory fields, data types, numeric ranges, units and domain plausibility. | High | Schema, format and conversion errors are explicitly reported. |
| URS-004 | The utility shall identify critical deviations for parameters stated in the method description and specification. | High | A critical deviation causes FAIL or a dedicated critical finding. |
| URS-005 | The utility shall generate output.json with machine-readable results, source values, warnings and failures. | High | JSON is suitable for LIMS/ELN/MES integration, QA/QC review and archival. |
| URS-006 | The result shall not depend on machine learning or undocumented heuristics. | Medium | All decisions are based on explicit rules, thresholds and input values. |
| URS-007 | The system shall preserve traceability between batch/sample, input data, applied rules and final status. | High | The output contains the batch/sample identifier and checked parameters. |
| URS-008 | The documentation shall support IQ/OQ/PQ preparation and inspection discussion. | Medium | URS, FS, CSV/JSON contract and test scenarios are supplied with the utility. |
| URS-009 | The utility shall support batch processing of multiple input.csv rows. | Medium | Each row is evaluated independently; errors in one row do not mask errors in others. |
| URS-010 | The utility shall support a simple operating model: demo mode and execution with input/output files. | Medium | The CLI scenario is reproducible in test and production environments. |
input.csv contract
| # | Field | Type | Sample | Purpose |
|---|---|---|---|---|
| 1 | BatchNumber | string | CHIRAL-CE-2026-001 | Batch or lot identifier used for traceability, review and deviation investigation. |
| 2 | MainArea | decimal | 1000000 | Controlled input parameter used by deterministic QC rules and traceable result generation. |
| 3 | ImpurityArea | decimal | 2000 | Controlled impurity used to assess conformance to approved specification. |
| 4 | TimeMain | decimal | 12.5 | Time-related process or analytical observation parameter. |
| 5 | TimeImpurity | decimal | 13.8 | Time-related process or analytical observation parameter. |
| 6 | Resolution | string / decimal | 2.5 | Controlled input parameter used by deterministic QC rules and traceable result generation. |
BatchNumber,MainArea,ImpurityArea,TimeMain,TimeImpurity,Resolution CHIRAL-CE-2026-001,1000000,2000,12.5,13.8,2.5 CHIRAL-CE-2026-002,950000,5000,12.4,13.7,2.3 CHIRAL-FAIL-2026-003,900000,50000,12.5,12.6,0.8
FS — Functional Specification
| ID | Function | Implementation |
|---|---|---|
| FS-001 | CSV import | Read input.csv in UTF-8/CSV-compatible format and validate the header and expected columns. |
| FS-002 | Schema validation | Check mandatory fields, column count, critical missing values and row structure. |
| FS-003 | Type conversion | Convert numeric, flag and text values; invalid formats are recorded as row-level errors. |
| FS-004 | Domain rule engine | Apply domain rules for CE Chiral Separation Checker, including limits from the utility description and approved specification. |
| FS-005 | Status aggregation | Produce final status: FAIL for critical failure, WARNING for non-critical deviation, PASS for conformance. |
| FS-006 | JSON export | Write output.json with detailed checks, source values, warnings, failures and critical findings. |
| FS-007 | Audit support | Keep the result structure suitable for review, deviation investigation, calculation reproduction and IQ/OQ/PQ preparation. |
| FS-008 | Integration contract | Support the production scenario: LIMS/ELN/MES creates input.csv, the utility returns output.json, and the portal displays description and documentation. |
| FS-009 | Error handling | Report errors unambiguously and do not substitute missing values with calculated values unless the rule is explicitly defined. |
| FS-010 | Version control support | Document the utility version, input contract, executable checksum and rule application date. |
Example output.json
{
"utilityId": "ce-chiral-separation-checker",
"utilityName": "CE_Chiral_Separation_Checker",
"overallStatus": "PASS|WARNING|FAIL",
"sourceFile": "input.csv",
"checks": [
{
"parameter": "BatchNumber",
"value": "CHIRAL-CE-2026-001",
"status": "PASS|WARNING|FAIL",
"message": "Rule-based check result"
},
{
"parameter": "MainArea",
"value": "1000000",
"status": "PASS|WARNING|FAIL",
"message": "Rule-based check result"
},
{
"parameter": "ImpurityArea",
"value": "2000",
"status": "PASS|WARNING|FAIL",
"message": "Rule-based check result"
},
{
"parameter": "TimeMain",
"value": "12.5",
"status": "PASS|WARNING|FAIL",
"message": "Rule-based check result"
},
{
"parameter": "TimeImpurity",
"value": "13.8",
"status": "PASS|WARNING|FAIL",
"message": "Rule-based check result"
},
{
"parameter": "Resolution",
"value": "2.5",
"status": "PASS|WARNING|FAIL",
"message": "Rule-based check result"
}
],
"criticalFindings": [],
"warnings": [],
"generatedFor": "QA/QC review and LIMS integration"
}
Traceability matrix
| URS | FS | OQ/PQ coverage |
|---|---|---|
| URS-001, URS-003 | FS-001, FS-002, FS-003 | OQ-001/OQ-002/OQ-003 |
| URS-002, URS-004 | FS-004, FS-005 | OQ-004/PQ-001 |
| URS-005, URS-007 | FS-006, FS-007 | OQ-005/PQ-002 |
| URS-008, URS-010 | FS-008, FS-010 | IQ-001/OQ-006 |
OQ/PQ test scenarios
| ID | Scenario | Expected result |
|---|---|---|
| OQ-001 | Valid sample row | PASS or acceptable WARNING according to the rules. |
| OQ-002 | Mandatory column missing | Schema error or FAIL. |
| OQ-003 | Non-numeric value in numeric field | Type-conversion error. |
| OQ-004 | Critical parameter outside limit | FAIL and critical finding. |
| OQ-005 | Multiple rows with different statuses | Independent row-level evaluation. |
| PQ-001 | User real batch/sample | Reviewed result with retained input/output files. |
QA/QC and change control
- Do not rename columns without updating the validator, documentation and test set.
- Retain
input.csv,output.json, executable version, documentation and checksum. - Before production use, perform IQ/OQ/PQ or equivalent CSV/CSA verification.
- Critical limits must be verified against the approved specification, local SOPs and registration dossier.
Included in packages
Lumex QC Suite
A single Lumex package combining the former Lumex and Lumex2 sets: instrumental and general pharmaceutical QC, AAS/ICP, CE, HPLC, NIR/PAT, stability, dissolution, content uniformity, system suitability and statistical control.
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